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Cluster: Rep_2462_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2462_c_28 Rep_2462_c_28_29 34701 35897 + 4.D.2.1.7
CAZyme Rep_2462_c_28 Rep_2462_c_28_30 35918 37087 + GT4
TC Rep_2462_c_28 Rep_2462_c_28_31 37512 39290 + 2.A.2.1.1
pfam Rep_2462_c_28 Rep_2462_c_28_32 39424 40518 - Metallophos
sulfatase Rep_2462_c_28 Rep_2462_c_28_33 40807 41991 + S1_2
TC Rep_2462_c_28 Rep_2462_c_28_34 42250 44496 + 3.A.7.16.1
STP Rep_2462_c_28 Rep_2462_c_28_35 44489 45241 + Pribosyltran
TC Rep_2462_c_28 Rep_2462_c_28_36 45225 48140 + 3.A.5.1.3
Gene ID: Rep_2462_c_28_29
Type: TC
Location: 34701 - 35897 (+)
Gene ID: Rep_2462_c_28_30
Type: CAZyme
Location: 35918 - 37087 (+)
Gene ID: Rep_2462_c_28_31
Type: TC
Location: 37512 - 39290 (+)
Gene ID: Rep_2462_c_28_32
Type: pfam
Location: 39424 - 40518 (-)
Gene ID: Rep_2462_c_28_33
Type: sulfatase
Location: 40807 - 41991 (+)
Gene ID: Rep_2462_c_28_34
Type: TC
Location: 42250 - 44496 (+)
Gene ID: Rep_2462_c_28_35
Type: STP
Location: 44489 - 45241 (+)
Gene ID: Rep_2462_c_28_36
Type: TC
Location: 45225 - 48140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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