Cluster: Rep_2462_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2462
- CGC Family ID: CGCFAM_04014
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2462_c_23 | Rep_2462_c_23_62 | 63196 | 65079 | - | 3.A.1.120.4 |
| TC | Rep_2462_c_23 | Rep_2462_c_23_63 | 65145 | 67664 | - | 3.A.3.23.2 |
| pfam | Rep_2462_c_23 | Rep_2462_c_23_64 | 67661 | 68911 | - | tRNA-synt_His |
| pfam | Rep_2462_c_23 | Rep_2462_c_23_65 | 68934 | 70325 | - | PGI |
| CAZyme | Rep_2462_c_23 | Rep_2462_c_23_66 | 70499 | 72175 | + | GH13_31 |
Gene ID: Rep_2462_c_23_62
Type: TC
Location: 63196 - 65079 (-)
Type: TC
Location: 63196 - 65079 (-)
Gene ID: Rep_2462_c_23_63
Type: TC
Location: 65145 - 67664 (-)
Type: TC
Location: 65145 - 67664 (-)
Gene ID: Rep_2462_c_23_64
Type: pfam
Location: 67661 - 68911 (-)
Type: pfam
Location: 67661 - 68911 (-)
Gene ID: Rep_2462_c_23_65
Type: pfam
Location: 68934 - 70325 (-)
Type: pfam
Location: 68934 - 70325 (-)
Gene ID: Rep_2462_c_23_66
Type: CAZyme
Location: 70499 - 72175 (+)
Type: CAZyme
Location: 70499 - 72175 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
Limihabitans
Species
Limihabitans stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.