Cluster: Rep_2462_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2462
- CGC Family ID: CGCFAM_02507
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2462_c_21 | Rep_2462_c_21_17 | 12449 | 13366 | - | GH43_32 |
| CAZyme | Rep_2462_c_21 | Rep_2462_c_21_18 | 13459 | 15912 | - | GH43 |
| TC | Rep_2462_c_21 | Rep_2462_c_21_19 | 15940 | 16839 | - | 3.A.1.1.11 |
| TC | Rep_2462_c_21 | Rep_2462_c_21_20 | 16832 | 17758 | - | 3.A.1.1.20 |
Gene ID: Rep_2462_c_21_17
Type: CAZyme
Location: 12449 - 13366 (-)
Type: CAZyme
Location: 12449 - 13366 (-)
Gene ID: Rep_2462_c_21_18
Type: CAZyme
Location: 13459 - 15912 (-)
Type: CAZyme
Location: 13459 - 15912 (-)
Gene ID: Rep_2462_c_21_19
Type: TC
Location: 15940 - 16839 (-)
Type: TC
Location: 15940 - 16839 (-)
Gene ID: Rep_2462_c_21_20
Type: TC
Location: 16832 - 17758 (-)
Type: TC
Location: 16832 - 17758 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
Limihabitans
Species
Limihabitans stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.