Cluster: Rep_2462_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2462
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2462_c_8 | Rep_2462_c_8_21 | 22311 | 23849 | - | GH13_44 |
| pfam | Rep_2462_c_8 | Rep_2462_c_8_22 | 24200 | 25348 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| pfam | Rep_2462_c_8 | Rep_2462_c_8_23 | 25437 | 25886 | - | TspO_MBR |
| TC | Rep_2462_c_8 | Rep_2462_c_8_24 | 26343 | 27410 | + | 2.A.19.5.2 |
Gene ID: Rep_2462_c_8_21
Type: CAZyme
Location: 22311 - 23849 (-)
Type: CAZyme
Location: 22311 - 23849 (-)
Gene ID: Rep_2462_c_8_22
Type: pfam
Location: 24200 - 25348 (+)
Type: pfam
Location: 24200 - 25348 (+)
Gene ID: Rep_2462_c_8_23
Type: pfam
Location: 25437 - 25886 (-)
Type: pfam
Location: 25437 - 25886 (-)
Gene ID: Rep_2462_c_8_24
Type: TC
Location: 26343 - 27410 (+)
Type: TC
Location: 26343 - 27410 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
Limihabitans
Species
Limihabitans stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.