Cluster: Rep_2462_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_2462
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2462_c_2 | Rep_2462_c_2_210 | 197879 | 199723 | - | GH13_39 |
| CAZyme | Rep_2462_c_2 | Rep_2462_c_2_211 | 199727 | 202132 | - | GT35 |
| CAZyme | Rep_2462_c_2 | Rep_2462_c_2_212 | 202172 | 204028 | - | CBM48 | GH13_9 |
| CAZyme | Rep_2462_c_2 | Rep_2462_c_2_213 | 204021 | 205532 | - | GH77 |
| pfam | Rep_2462_c_2 | Rep_2462_c_2_214 | 205861 | 206517 | - | YhhN |
| TC | Rep_2462_c_2 | Rep_2462_c_2_215 | 206758 | 207777 | + | 2.A.7.3.47 |
Gene ID: Rep_2462_c_2_210
Type: CAZyme
Location: 197879 - 199723 (-)
Type: CAZyme
Location: 197879 - 199723 (-)
Gene ID: Rep_2462_c_2_211
Type: CAZyme
Location: 199727 - 202132 (-)
Type: CAZyme
Location: 199727 - 202132 (-)
Gene ID: Rep_2462_c_2_212
Type: CAZyme
Location: 202172 - 204028 (-)
Type: CAZyme
Location: 202172 - 204028 (-)
Gene ID: Rep_2462_c_2_213
Type: CAZyme
Location: 204021 - 205532 (-)
Type: CAZyme
Location: 204021 - 205532 (-)
Gene ID: Rep_2462_c_2_214
Type: pfam
Location: 205861 - 206517 (-)
Type: pfam
Location: 205861 - 206517 (-)
Gene ID: Rep_2462_c_2_215
Type: TC
Location: 206758 - 207777 (+)
Type: TC
Location: 206758 - 207777 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
Limihabitans
Species
Limihabitans stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.