Cluster: Rep_2462_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2462
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2462_c_41 | Rep_2462_c_41_44 | 56530 | 58137 | - | 8.A.7.1.1 |
| CAZyme | Rep_2462_c_41 | Rep_2462_c_41_45 | 58165 | 59283 | - | CE9 |
| NULL(UNKNOWN) | Rep_2462_c_41 | Rep_2462_c_41_46 | 59300 | 59557 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2462_c_41 | Rep_2462_c_41_47 | 59879 | 60436 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2462_c_41 | Rep_2462_c_41_48 | 60583 | 61077 | + | 4.A.6.1.9 |
| pfam | Rep_2462_c_41 | Rep_2462_c_41_49 | 61145 | 61936 | + | EII-Sor |
| TC | Rep_2462_c_41 | Rep_2462_c_41_50 | 61938 | 62813 | + | 4.A.6.1.17 |
Gene ID: Rep_2462_c_41_44
Type: TC
Location: 56530 - 58137 (-)
Type: TC
Location: 56530 - 58137 (-)
Gene ID: Rep_2462_c_41_45
Type: CAZyme
Location: 58165 - 59283 (-)
Type: CAZyme
Location: 58165 - 59283 (-)
Gene ID: Rep_2462_c_41_46
Type:
Location: 59300 - 59557 (-)
Type:
Location: 59300 - 59557 (-)
Gene ID: Rep_2462_c_41_47
Type:
Location: 59879 - 60436 (-)
Type:
Location: 59879 - 60436 (-)
Gene ID: Rep_2462_c_41_48
Type: TC
Location: 60583 - 61077 (+)
Type: TC
Location: 60583 - 61077 (+)
Gene ID: Rep_2462_c_41_49
Type: pfam
Location: 61145 - 61936 (+)
Type: pfam
Location: 61145 - 61936 (+)
Gene ID: Rep_2462_c_41_50
Type: TC
Location: 61938 - 62813 (+)
Type: TC
Location: 61938 - 62813 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
Limihabitans
Species
Limihabitans stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.