Cluster: Rep_2462_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2462
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2462_c_2 | Rep_2462_c_2_8 | 7206 | 7799 | - | 4.F.1.1.8 |
| pfam | Rep_2462_c_2 | Rep_2462_c_2_9 | 7796 | 9118 | - | UPF0004 | Radical_SAM | TRAM_2 |
| TC | Rep_2462_c_2 | Rep_2462_c_2_10 | 9130 | 12174 | - | 3.A.12.1.1 |
| peptidase | Rep_2462_c_2 | Rep_2462_c_2_11 | 12608 | 13876 | - | M16.A15 |
| CAZyme | Rep_2462_c_2 | Rep_2462_c_2_12 | 13888 | 14592 | - | CE4 |
Gene ID: Rep_2462_c_2_8
Type: TC
Location: 7206 - 7799 (-)
Type: TC
Location: 7206 - 7799 (-)
Gene ID: Rep_2462_c_2_9
Type: pfam
Location: 7796 - 9118 (-)
Type: pfam
Location: 7796 - 9118 (-)
Gene ID: Rep_2462_c_2_10
Type: TC
Location: 9130 - 12174 (-)
Type: TC
Location: 9130 - 12174 (-)
Gene ID: Rep_2462_c_2_11
Type: peptidase
Location: 12608 - 13876 (-)
Type: peptidase
Location: 12608 - 13876 (-)
Gene ID: Rep_2462_c_2_12
Type: CAZyme
Location: 13888 - 14592 (-)
Type: CAZyme
Location: 13888 - 14592 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
Limihabitans
Species
Limihabitans stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.