Cluster: Rep_2459_CGC6
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: Rep_2459
- CGC Family ID: CGCFAM_00037
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2459_c_6 | Rep_2459_c_6_75 | 83249 | 84517 | - | 9.A.40.2.4 |
| NULL(UNKNOWN) | Rep_2459_c_6 | Rep_2459_c_6_76 | 85304 | 86191 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2459_c_6 | Rep_2459_c_6_77 | 86260 | 88008 | + | 3.A.1.32.2 |
| pfam | Rep_2459_c_6 | Rep_2459_c_6_78 | 88023 | 88976 | + | ECF-ribofla_trS | DUF6580 |
| NULL(UNKNOWN) | Rep_2459_c_6 | Rep_2459_c_6_79 | 89354 | 89788 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2459_c_6 | Rep_2459_c_6_80 | 89775 | 91370 | - | GH77 |
| CAZyme | Rep_2459_c_6 | Rep_2459_c_6_81 | 91580 | 93256 | - | CBM34 | GH13_20 |
| TC | Rep_2459_c_6 | Rep_2459_c_6_82 | 93258 | 95156 | - | 3.A.1.1.26 |
| CAZyme | Rep_2459_c_6 | Rep_2459_c_6_83 | 95172 | 96683 | - | GH13_36 |
| TC | Rep_2459_c_6 | Rep_2459_c_6_84 | 96696 | 97571 | - | 3.A.1.1.27 |
| TC | Rep_2459_c_6 | Rep_2459_c_6_85 | 97573 | 99078 | - | 3.A.1.1.27 |
| pfam | Rep_2459_c_6 | Rep_2459_c_6_86 | 99146 | 100384 | - | SBP_bac_8 |
| CAZyme | Rep_2459_c_6 | Rep_2459_c_6_87 | 100457 | 101674 | - | GH13_14 |
Gene ID: Rep_2459_c_6_75
Type: TC
Location: 83249 - 84517 (-)
Type: TC
Location: 83249 - 84517 (-)
Gene ID: Rep_2459_c_6_76
Type:
Location: 85304 - 86191 (+)
Type:
Location: 85304 - 86191 (+)
Gene ID: Rep_2459_c_6_77
Type: TC
Location: 86260 - 88008 (+)
Type: TC
Location: 86260 - 88008 (+)
Gene ID: Rep_2459_c_6_78
Type: pfam
Location: 88023 - 88976 (+)
Type: pfam
Location: 88023 - 88976 (+)
Gene ID: Rep_2459_c_6_79
Type:
Location: 89354 - 89788 (-)
Type:
Location: 89354 - 89788 (-)
Gene ID: Rep_2459_c_6_80
Type: CAZyme
Location: 89775 - 91370 (-)
Type: CAZyme
Location: 89775 - 91370 (-)
Gene ID: Rep_2459_c_6_81
Type: CAZyme
Location: 91580 - 93256 (-)
Type: CAZyme
Location: 91580 - 93256 (-)
Gene ID: Rep_2459_c_6_82
Type: TC
Location: 93258 - 95156 (-)
Type: TC
Location: 93258 - 95156 (-)
Gene ID: Rep_2459_c_6_83
Type: CAZyme
Location: 95172 - 96683 (-)
Type: CAZyme
Location: 95172 - 96683 (-)
Gene ID: Rep_2459_c_6_84
Type: TC
Location: 96696 - 97571 (-)
Type: TC
Location: 96696 - 97571 (-)
Gene ID: Rep_2459_c_6_85
Type: TC
Location: 97573 - 99078 (-)
Type: TC
Location: 97573 - 99078 (-)
Gene ID: Rep_2459_c_6_86
Type: pfam
Location: 99146 - 100384 (-)
Type: pfam
Location: 99146 - 100384 (-)
Gene ID: Rep_2459_c_6_87
Type: CAZyme
Location: 100457 - 101674 (-)
Type: CAZyme
Location: 100457 - 101674 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
UMGS929
Species
UMGS929 sp900546875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.