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Cluster: Rep_2459_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2459_c_12 Rep_2459_c_12_1 552 2183 + GH28
CAZyme Rep_2459_c_12 Rep_2459_c_12_2 2547 5132 + GH28
NULL(UNKNOWN) Rep_2459_c_12 Rep_2459_c_12_3 5165 8068 + NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_2459_c_12 Rep_2459_c_12_4 8952 10199 + HTH_AraC | HTH_AraC
TC Rep_2459_c_12 Rep_2459_c_12_5 10168 11859 + 8.A.59.2.1
NULL(UNKNOWN) Rep_2459_c_12 Rep_2459_c_12_6 12089 13018 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2459_c_12 Rep_2459_c_12_7 13765 15177 + SBP_bac_1
TC Rep_2459_c_12 Rep_2459_c_12_8 15201 16088 + 3.A.1.1.20
TC Rep_2459_c_12 Rep_2459_c_12_9 16085 16978 + 3.A.1.1.6
CAZyme Rep_2459_c_12 Rep_2459_c_12_10 17073 19313 + GH65
CAZyme Rep_2459_c_12 Rep_2459_c_12_11 19310 21394 + GH65
Gene ID: Rep_2459_c_12_1
Type: CAZyme
Location: 552 - 2183 (+)
Gene ID: Rep_2459_c_12_2
Type: CAZyme
Location: 2547 - 5132 (+)
Gene ID: Rep_2459_c_12_3
Type:
Location: 5165 - 8068 (+)
Gene ID: Rep_2459_c_12_4
Type: TF
Location: 8952 - 10199 (+)
Gene ID: Rep_2459_c_12_5
Type: TC
Location: 10168 - 11859 (+)
Gene ID: Rep_2459_c_12_6
Type:
Location: 12089 - 13018 (+)
Gene ID: Rep_2459_c_12_7
Type: pfam
Location: 13765 - 15177 (+)
Gene ID: Rep_2459_c_12_8
Type: TC
Location: 15201 - 16088 (+)
Gene ID: Rep_2459_c_12_9
Type: TC
Location: 16085 - 16978 (+)
Gene ID: Rep_2459_c_12_10
Type: CAZyme
Location: 17073 - 19313 (+)
Gene ID: Rep_2459_c_12_11
Type: CAZyme
Location: 19310 - 21394 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
CAG-314
→
Genus
UMGS929
→
Species
UMGS929 sp900546875

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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