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Cluster: Rep_2449_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2449_c_0 Rep_2449_c_0_274 268462 269211 + CE4
pfam Rep_2449_c_0 Rep_2449_c_0_275 269285 270652 + TRAM | tRNA_U5-meth_tr
peptidase Rep_2449_c_0 Rep_2449_c_0_276 270710 272002 + M16.UNB
TC Rep_2449_c_0 Rep_2449_c_0_277 272071 275049 + 3.A.12.1.1
pfam Rep_2449_c_0 Rep_2449_c_0_278 275053 276426 + UPF0004 | Radical_SAM | TRAM_2
TC Rep_2449_c_0 Rep_2449_c_0_279 276438 277034 + 4.F.1.1.7
pfam Rep_2449_c_0 Rep_2449_c_0_280 277131 278120 + RecA | Rad51 | RecA_C
CAZyme Rep_2449_c_0 Rep_2449_c_0_281 278412 280712 - GT51
Gene ID: Rep_2449_c_0_274
Type: CAZyme
Location: 268462 - 269211 (+)
Gene ID: Rep_2449_c_0_275
Type: pfam
Location: 269285 - 270652 (+)
Gene ID: Rep_2449_c_0_276
Type: peptidase
Location: 270710 - 272002 (+)
Gene ID: Rep_2449_c_0_277
Type: TC
Location: 272071 - 275049 (+)
Gene ID: Rep_2449_c_0_278
Type: pfam
Location: 275053 - 276426 (+)
Gene ID: Rep_2449_c_0_279
Type: TC
Location: 276438 - 277034 (+)
Gene ID: Rep_2449_c_0_280
Type: pfam
Location: 277131 - 278120 (+)
Gene ID: Rep_2449_c_0_281
Type: CAZyme
Location: 278412 - 280712 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
UBA1242
→
Genus
CAKVNM01
→
Species
CAKVNM01 sp934749845

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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