Cluster: Rep_2443_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2443
- CGC Family ID: CGCFAM_00268
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2443_c_10 | Rep_2443_c_10_33 | 37446 | 38183 | + | CE4 |
| TC | Rep_2443_c_10 | Rep_2443_c_10_34 | 38260 | 41016 | + | 3.A.12.1.1 |
| pfam | Rep_2443_c_10 | Rep_2443_c_10_35 | 41026 | 42348 | + | UPF0004 | Radical_SAM | TRAM_2 |
| TC | Rep_2443_c_10 | Rep_2443_c_10_36 | 42345 | 43202 | + | 4.F.1.1.7 |
| STP | Rep_2443_c_10 | Rep_2443_c_10_37 | 43214 | 44242 | + | ATPase_2 |
| CAZyme | Rep_2443_c_10 | Rep_2443_c_10_38 | 44243 | 46456 | - | GT51 |
Gene ID: Rep_2443_c_10_33
Type: CAZyme
Location: 37446 - 38183 (+)
Type: CAZyme
Location: 37446 - 38183 (+)
Gene ID: Rep_2443_c_10_34
Type: TC
Location: 38260 - 41016 (+)
Type: TC
Location: 38260 - 41016 (+)
Gene ID: Rep_2443_c_10_35
Type: pfam
Location: 41026 - 42348 (+)
Type: pfam
Location: 41026 - 42348 (+)
Gene ID: Rep_2443_c_10_36
Type: TC
Location: 42345 - 43202 (+)
Type: TC
Location: 42345 - 43202 (+)
Gene ID: Rep_2443_c_10_37
Type: STP
Location: 43214 - 44242 (+)
Type: STP
Location: 43214 - 44242 (+)
Gene ID: Rep_2443_c_10_38
Type: CAZyme
Location: 44243 - 46456 (-)
Type: CAZyme
Location: 44243 - 46456 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1242
Genus
Caccovivens
Species
Caccovivens sp949292985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.