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Cluster: Rep_242_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_242_c_251 Rep_242_c_251_23 28556 29350 + 3.A.1.140.1
pfam Rep_242_c_251 Rep_242_c_251_24 29379 30704 + AA_kinase | ACT_9
pfam Rep_242_c_251 Rep_242_c_251_25 30777 31943 + Orn_DAP_Arg_deC | Orn_Arg_deC_N
CAZyme Rep_242_c_251 Rep_242_c_251_26 31940 33133 + GT2
pfam Rep_242_c_251 Rep_242_c_251_27 33130 34275 + Glyco_transf_4 | Glyco_trans_4_4
pfam Rep_242_c_251 Rep_242_c_251_28 34364 36364 + FBPase_2
TC Rep_242_c_251 Rep_242_c_251_29 36429 37799 + 2.A.66.1.32
TC Rep_242_c_251 Rep_242_c_251_30 37899 38522 + 2.A.115.2.14
Gene ID: Rep_242_c_251_23
Type: TC
Location: 28556 - 29350 (+)
Gene ID: Rep_242_c_251_24
Type: pfam
Location: 29379 - 30704 (+)
Gene ID: Rep_242_c_251_25
Type: pfam
Location: 30777 - 31943 (+)
Gene ID: Rep_242_c_251_26
Type: CAZyme
Location: 31940 - 33133 (+)
Gene ID: Rep_242_c_251_27
Type: pfam
Location: 33130 - 34275 (+)
Gene ID: Rep_242_c_251_28
Type: pfam
Location: 34364 - 36364 (+)
Gene ID: Rep_242_c_251_29
Type: TC
Location: 36429 - 37799 (+)
Gene ID: Rep_242_c_251_30
Type: TC
Location: 37899 - 38522 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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