Cluster: Rep_240_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_240
- CGC Family ID: CGCFAM_00006
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_240_c_23 | Rep_240_c_23_25 | 27939 | 28607 | - | 9.B.18.1.3 |
| CAZyme | Rep_240_c_23 | Rep_240_c_23_26 | 28604 | 29725 | - | GT4 |
| NULL(UNKNOWN) | Rep_240_c_23 | Rep_240_c_23_27 | 29759 | 31069 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_240_c_23 | Rep_240_c_23_28 | 31089 | 32324 | - | GT4 |
| CAZyme | Rep_240_c_23 | Rep_240_c_23_29 | 32321 | 33460 | - | GT4 |
| pfam | Rep_240_c_23 | Rep_240_c_23_30 | 33483 | 34109 | - | Hexapep | Hexapep_2 |
| CAZyme | Rep_240_c_23 | Rep_240_c_23_31 | 34084 | 34905 | - | GT4 |
Gene ID: Rep_240_c_23_25
Type: TC
Location: 27939 - 28607 (-)
Type: TC
Location: 27939 - 28607 (-)
Gene ID: Rep_240_c_23_26
Type: CAZyme
Location: 28604 - 29725 (-)
Type: CAZyme
Location: 28604 - 29725 (-)
Gene ID: Rep_240_c_23_27
Type:
Location: 29759 - 31069 (-)
Type:
Location: 29759 - 31069 (-)
Gene ID: Rep_240_c_23_28
Type: CAZyme
Location: 31089 - 32324 (-)
Type: CAZyme
Location: 31089 - 32324 (-)
Gene ID: Rep_240_c_23_29
Type: CAZyme
Location: 32321 - 33460 (-)
Type: CAZyme
Location: 32321 - 33460 (-)
Gene ID: Rep_240_c_23_30
Type: pfam
Location: 33483 - 34109 (-)
Type: pfam
Location: 33483 - 34109 (-)
Gene ID: Rep_240_c_23_31
Type: CAZyme
Location: 34084 - 34905 (-)
Type: CAZyme
Location: 34084 - 34905 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000431975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.