Cluster: Rep_240_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_240
- CGC Family ID: CGCFAM_10980
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_240_c_165 | Rep_240_c_165_1 | 584 | 3076 | + | GH20 |
| pfam | Rep_240_c_165 | Rep_240_c_165_2 | 3344 | 4840 | + | FGGY_N | FGGY_C |
| pfam | Rep_240_c_165 | Rep_240_c_165_3 | 4936 | 6255 | + | AP_endonuc_2 |
| TC | Rep_240_c_165 | Rep_240_c_165_4 | 6823 | 10095 | + | 1.B.14.6.2 |
Gene ID: Rep_240_c_165_1
Type: CAZyme
Location: 584 - 3076 (+)
Type: CAZyme
Location: 584 - 3076 (+)
Gene ID: Rep_240_c_165_2
Type: pfam
Location: 3344 - 4840 (+)
Type: pfam
Location: 3344 - 4840 (+)
Gene ID: Rep_240_c_165_3
Type: pfam
Location: 4936 - 6255 (+)
Type: pfam
Location: 4936 - 6255 (+)
Gene ID: Rep_240_c_165_4
Type: TC
Location: 6823 - 10095 (+)
Type: TC
Location: 6823 - 10095 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000431975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.