Cluster: Rep_2402_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2402
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2402_c_40 | Rep_2402_c_40_18 | 16630 | 18039 | - | 2.A.1.3.30 |
| TC | Rep_2402_c_40 | Rep_2402_c_40_19 | 18060 | 18650 | - | 2.A.115.2.14 |
| TF | Rep_2402_c_40 | Rep_2402_c_40_20 | 18724 | 19134 | - | MarR |
| STP | Rep_2402_c_40 | Rep_2402_c_40_21 | 19246 | 20586 | - | AAA |
| CAZyme | Rep_2402_c_40 | Rep_2402_c_40_22 | 20634 | 21368 | - | CE4 |
Gene ID: Rep_2402_c_40_18
Type: TC
Location: 16630 - 18039 (-)
Type: TC
Location: 16630 - 18039 (-)
Gene ID: Rep_2402_c_40_19
Type: TC
Location: 18060 - 18650 (-)
Type: TC
Location: 18060 - 18650 (-)
Gene ID: Rep_2402_c_40_20
Type: TF
Location: 18724 - 19134 (-)
Type: TF
Location: 18724 - 19134 (-)
Gene ID: Rep_2402_c_40_21
Type: STP
Location: 19246 - 20586 (-)
Type: STP
Location: 19246 - 20586 (-)
Gene ID: Rep_2402_c_40_22
Type: CAZyme
Location: 20634 - 21368 (-)
Type: CAZyme
Location: 20634 - 21368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.