Cluster: Rep_2402_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2402
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2402_c_87 | Rep_2402_c_87_15 | 10187 | 10621 | + | 1.E.19.1.4 |
| NULL(UNKNOWN) | Rep_2402_c_87 | Rep_2402_c_87_16 | 10754 | 11689 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2402_c_87 | Rep_2402_c_87_17 | 11772 | 12068 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2402_c_87 | Rep_2402_c_87_18 | 12070 | 12960 | + | GH24 |
Gene ID: Rep_2402_c_87_15
Type: TC
Location: 10187 - 10621 (+)
Type: TC
Location: 10187 - 10621 (+)
Gene ID: Rep_2402_c_87_16
Type:
Location: 10754 - 11689 (+)
Type:
Location: 10754 - 11689 (+)
Gene ID: Rep_2402_c_87_17
Type:
Location: 11772 - 12068 (+)
Type:
Location: 11772 - 12068 (+)
Gene ID: Rep_2402_c_87_18
Type: CAZyme
Location: 12070 - 12960 (+)
Type: CAZyme
Location: 12070 - 12960 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.