Cluster: Rep_2402_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2402
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2402_c_67 | Rep_2402_c_67_42 | 44384 | 46285 | + | 3.A.1.121.4 |
| pfam | Rep_2402_c_67 | Rep_2402_c_67_43 | 46314 | 46751 | - | YqeY |
| CAZyme | Rep_2402_c_67 | Rep_2402_c_67_44 | 46829 | 49222 | - | GH13_14 |
Gene ID: Rep_2402_c_67_42
Type: TC
Location: 44384 - 46285 (+)
Type: TC
Location: 44384 - 46285 (+)
Gene ID: Rep_2402_c_67_43
Type: pfam
Location: 46314 - 46751 (-)
Type: pfam
Location: 46314 - 46751 (-)
Gene ID: Rep_2402_c_67_44
Type: CAZyme
Location: 46829 - 49222 (-)
Type: CAZyme
Location: 46829 - 49222 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.