Cluster: Rep_2402_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2402
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2402_c_56 | Rep_2402_c_56_19 | 20740 | 21756 | - | GT2 |
| pfam | Rep_2402_c_56 | Rep_2402_c_56_20 | 21757 | 22485 | - | TPR_12 |
| pfam | Rep_2402_c_56 | Rep_2402_c_56_21 | 22498 | 23472 | - | DNA_pol3_delta | DNA_pol3_delta_C |
| TC | Rep_2402_c_56 | Rep_2402_c_56_22 | 23482 | 25719 | - | 3.A.11.1.3 |
Gene ID: Rep_2402_c_56_19
Type: CAZyme
Location: 20740 - 21756 (-)
Type: CAZyme
Location: 20740 - 21756 (-)
Gene ID: Rep_2402_c_56_20
Type: pfam
Location: 21757 - 22485 (-)
Type: pfam
Location: 21757 - 22485 (-)
Gene ID: Rep_2402_c_56_21
Type: pfam
Location: 22498 - 23472 (-)
Type: pfam
Location: 22498 - 23472 (-)
Gene ID: Rep_2402_c_56_22
Type: TC
Location: 23482 - 25719 (-)
Type: TC
Location: 23482 - 25719 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.