Cluster: Rep_2402_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2402
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2402_c_15 | Rep_2402_c_15_2 | 787 | 3903 | + | GH13_19 |
| TC | Rep_2402_c_15 | Rep_2402_c_15_3 | 4276 | 5709 | + | 3.A.1.1.45 |
| TC | Rep_2402_c_15 | Rep_2402_c_15_4 | 5930 | 6775 | + | 3.A.1.1.45 |
| TC | Rep_2402_c_15 | Rep_2402_c_15_5 | 6775 | 7647 | + | 3.A.1.1.45 |
| CAZyme | Rep_2402_c_15 | Rep_2402_c_15_6 | 7724 | 9211 | + | GH77 |
Gene ID: Rep_2402_c_15_2
Type: CAZyme
Location: 787 - 3903 (+)
Type: CAZyme
Location: 787 - 3903 (+)
Gene ID: Rep_2402_c_15_3
Type: TC
Location: 4276 - 5709 (+)
Type: TC
Location: 4276 - 5709 (+)
Gene ID: Rep_2402_c_15_4
Type: TC
Location: 5930 - 6775 (+)
Type: TC
Location: 5930 - 6775 (+)
Gene ID: Rep_2402_c_15_5
Type: TC
Location: 6775 - 7647 (+)
Type: TC
Location: 6775 - 7647 (+)
Gene ID: Rep_2402_c_15_6
Type: CAZyme
Location: 7724 - 9211 (+)
Type: CAZyme
Location: 7724 - 9211 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.