Cluster: Rep_2402_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2402
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2402_c_55 | Rep_2402_c_55_56 | 62234 | 64186 | - | GH25 |
| NULL(UNKNOWN) | Rep_2402_c_55 | Rep_2402_c_55_57 | 64191 | 65009 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2402_c_55 | Rep_2402_c_55_58 | 65013 | 65969 | - | DUF6077 |
| TC | Rep_2402_c_55 | Rep_2402_c_55_59 | 66231 | 67601 | + | 9.B.18.1.3 |
Gene ID: Rep_2402_c_55_56
Type: CAZyme
Location: 62234 - 64186 (-)
Type: CAZyme
Location: 62234 - 64186 (-)
Gene ID: Rep_2402_c_55_57
Type:
Location: 64191 - 65009 (-)
Type:
Location: 64191 - 65009 (-)
Gene ID: Rep_2402_c_55_58
Type: pfam
Location: 65013 - 65969 (-)
Type: pfam
Location: 65013 - 65969 (-)
Gene ID: Rep_2402_c_55_59
Type: TC
Location: 66231 - 67601 (+)
Type: TC
Location: 66231 - 67601 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.