Cluster: Rep_2402_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2402
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2402_c_52 | Rep_2402_c_52_106 | 113746 | 115650 | + | 2.A.67.4.2 |
| pfam | Rep_2402_c_52 | Rep_2402_c_52_107 | 115656 | 116000 | + | PqqD |
| CAZyme | Rep_2402_c_52 | Rep_2402_c_52_108 | 116100 | 118886 | + | GT51 |
Gene ID: Rep_2402_c_52_106
Type: TC
Location: 113746 - 115650 (+)
Type: TC
Location: 113746 - 115650 (+)
Gene ID: Rep_2402_c_52_107
Type: pfam
Location: 115656 - 116000 (+)
Type: pfam
Location: 115656 - 116000 (+)
Gene ID: Rep_2402_c_52_108
Type: CAZyme
Location: 116100 - 118886 (+)
Type: CAZyme
Location: 116100 - 118886 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.