Cluster: Rep_2393_CGC8
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_2393
- CGC Family ID: CGCFAM_05910
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2393_c_0 | Rep_2393_c_0_480 | 565650 | 566450 | - | GT2 |
| CAZyme | Rep_2393_c_0 | Rep_2393_c_0_481 | 566492 | 567502 | - | GT2 |
| pfam | Rep_2393_c_0 | Rep_2393_c_0_482 | 567486 | 568514 | - | Acyl_transf_3 |
| pfam | Rep_2393_c_0 | Rep_2393_c_0_483 | 568549 | 568926 | - | DUF2304 |
| CAZyme | Rep_2393_c_0 | Rep_2393_c_0_484 | 568939 | 569628 | - | GT2 |
| pfam | Rep_2393_c_0 | Rep_2393_c_0_485 | 569662 | 571848 | - | DUF2142 |
| CAZyme | Rep_2393_c_0 | Rep_2393_c_0_486 | 571921 | 573690 | - | GT2 |
| TC | Rep_2393_c_0 | Rep_2393_c_0_487 | 573695 | 574933 | - | 3.A.1.103.4 |
| TC | Rep_2393_c_0 | Rep_2393_c_0_488 | 574952 | 575728 | - | 3.A.1.103.4 |
| pfam | Rep_2393_c_0 | Rep_2393_c_0_489 | 575905 | 576732 | - | PseudoU_synth_1 | PseudoU_synth_1 |
| TC | Rep_2393_c_0 | Rep_2393_c_0_490 | 576760 | 577566 | - | 3.A.1.26.7 |
| TC | Rep_2393_c_0 | Rep_2393_c_0_491 | 577563 | 578417 | - | 3.A.1.25.6 |
| TC | Rep_2393_c_0 | Rep_2393_c_0_492 | 578438 | 579295 | - | 3.A.1.26.7 |
Gene ID: Rep_2393_c_0_480
Type: CAZyme
Location: 565650 - 566450 (-)
Type: CAZyme
Location: 565650 - 566450 (-)
Gene ID: Rep_2393_c_0_481
Type: CAZyme
Location: 566492 - 567502 (-)
Type: CAZyme
Location: 566492 - 567502 (-)
Gene ID: Rep_2393_c_0_482
Type: pfam
Location: 567486 - 568514 (-)
Type: pfam
Location: 567486 - 568514 (-)
Gene ID: Rep_2393_c_0_483
Type: pfam
Location: 568549 - 568926 (-)
Type: pfam
Location: 568549 - 568926 (-)
Gene ID: Rep_2393_c_0_484
Type: CAZyme
Location: 568939 - 569628 (-)
Type: CAZyme
Location: 568939 - 569628 (-)
Gene ID: Rep_2393_c_0_485
Type: pfam
Location: 569662 - 571848 (-)
Type: pfam
Location: 569662 - 571848 (-)
Gene ID: Rep_2393_c_0_486
Type: CAZyme
Location: 571921 - 573690 (-)
Type: CAZyme
Location: 571921 - 573690 (-)
Gene ID: Rep_2393_c_0_487
Type: TC
Location: 573695 - 574933 (-)
Type: TC
Location: 573695 - 574933 (-)
Gene ID: Rep_2393_c_0_488
Type: TC
Location: 574952 - 575728 (-)
Type: TC
Location: 574952 - 575728 (-)
Gene ID: Rep_2393_c_0_489
Type: pfam
Location: 575905 - 576732 (-)
Type: pfam
Location: 575905 - 576732 (-)
Gene ID: Rep_2393_c_0_490
Type: TC
Location: 576760 - 577566 (-)
Type: TC
Location: 576760 - 577566 (-)
Gene ID: Rep_2393_c_0_491
Type: TC
Location: 577563 - 578417 (-)
Type: TC
Location: 577563 - 578417 (-)
Gene ID: Rep_2393_c_0_492
Type: TC
Location: 578438 - 579295 (-)
Type: TC
Location: 578438 - 579295 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Jutongia
Species
Jutongia huaianensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2393_c_0_487 | vegan > omnivore | 1.22929 | 0.00241 |