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Cluster: Rep_2393_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2393_c_0 Rep_2393_c_0_391 456597 457805 - 9.B.174.1.2
STP Rep_2393_c_0 Rep_2393_c_0_392 457914 459206 - Peptidase_M23
pfam Rep_2393_c_0 Rep_2393_c_0_393 459272 460174 - FtsX | FtsX_ECD
TC Rep_2393_c_0 Rep_2393_c_0_394 460171 460902 - 3.A.1.140.1
pfam Rep_2393_c_0 Rep_2393_c_0_395 460988 462076 - HTH_30 | GGDEF_2
TC Rep_2393_c_0 Rep_2393_c_0_396 462289 463401 - 3.A.1.1.22
TC Rep_2393_c_0 Rep_2393_c_0_397 463608 464486 - 2.A.115.1.2
CAZyme Rep_2393_c_0 Rep_2393_c_0_398 464520 465290 - GT26
Gene ID: Rep_2393_c_0_391
Type: TC
Location: 456597 - 457805 (-)
Gene ID: Rep_2393_c_0_392
Type: STP
Location: 457914 - 459206 (-)
Gene ID: Rep_2393_c_0_393
Type: pfam
Location: 459272 - 460174 (-)
Gene ID: Rep_2393_c_0_394
Type: TC
Location: 460171 - 460902 (-)
Gene ID: Rep_2393_c_0_395
Type: pfam
Location: 460988 - 462076 (-)
Gene ID: Rep_2393_c_0_396
Type: TC
Location: 462289 - 463401 (-)
Gene ID: Rep_2393_c_0_397
Type: TC
Location: 463608 - 464486 (-)
Gene ID: Rep_2393_c_0_398
Type: CAZyme
Location: 464520 - 465290 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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