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Cluster: Rep_2393_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2393_c_0 Rep_2393_c_0_340 396457 397533 - 8.A.59.4.1
pfam Rep_2393_c_0 Rep_2393_c_0_341 397612 398586 - HMGL-like
pfam Rep_2393_c_0 Rep_2393_c_0_342 398887 400356 - UPF0236
TC Rep_2393_c_0 Rep_2393_c_0_343 400612 401406 - 3.D.6.1.2
TC Rep_2393_c_0 Rep_2393_c_0_344 401422 402021 - 3.D.6.1.2
TC Rep_2393_c_0 Rep_2393_c_0_345 402021 402851 - 3.D.6.1.2
TC Rep_2393_c_0 Rep_2393_c_0_346 402864 403529 - 3.D.6.1.2
TC Rep_2393_c_0 Rep_2393_c_0_347 403519 404511 - 3.D.6.1.2
TC Rep_2393_c_0 Rep_2393_c_0_348 404525 405847 - 3.D.6.1.2
STP Rep_2393_c_0 Rep_2393_c_0_349 406390 408528 - MCPsignal | dCache_1
CAZyme Rep_2393_c_0 Rep_2393_c_0_350 408745 411573 - GH5_4
TC Rep_2393_c_0 Rep_2393_c_0_351 411814 412791 - 3.A.1.2.21
TC Rep_2393_c_0 Rep_2393_c_0_352 412804 414813 - 1.B.52.2.2
Gene ID: Rep_2393_c_0_340
Type: TC
Location: 396457 - 397533 (-)
Gene ID: Rep_2393_c_0_341
Type: pfam
Location: 397612 - 398586 (-)
Gene ID: Rep_2393_c_0_342
Type: pfam
Location: 398887 - 400356 (-)
Gene ID: Rep_2393_c_0_343
Type: TC
Location: 400612 - 401406 (-)
Gene ID: Rep_2393_c_0_344
Type: TC
Location: 401422 - 402021 (-)
Gene ID: Rep_2393_c_0_345
Type: TC
Location: 402021 - 402851 (-)
Gene ID: Rep_2393_c_0_346
Type: TC
Location: 402864 - 403529 (-)
Gene ID: Rep_2393_c_0_347
Type: TC
Location: 403519 - 404511 (-)
Gene ID: Rep_2393_c_0_348
Type: TC
Location: 404525 - 405847 (-)
Gene ID: Rep_2393_c_0_349
Type: STP
Location: 406390 - 408528 (-)
Gene ID: Rep_2393_c_0_350
Type: CAZyme
Location: 408745 - 411573 (-)
Gene ID: Rep_2393_c_0_351
Type: TC
Location: 411814 - 412791 (-)
Gene ID: Rep_2393_c_0_352
Type: TC
Location: 412804 - 414813 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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