Cluster: Rep_2393_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2393
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2393_c_0 | Rep_2393_c_0_96 | 106835 | 107572 | + | 3.A.1.3.15 |
| peptidase | Rep_2393_c_0 | Rep_2393_c_0_97 | 107617 | 109257 | + | M20.UPW |
| CAZyme | Rep_2393_c_0 | Rep_2393_c_0_98 | 109366 | 110205 | - | CE4 |
| CAZyme | Rep_2393_c_0 | Rep_2393_c_0_99 | 110198 | 111058 | - | CE4 |
| TC | Rep_2393_c_0 | Rep_2393_c_0_100 | 111190 | 111855 | - | 3.A.1.3.15 |
| TC | Rep_2393_c_0 | Rep_2393_c_0_101 | 111887 | 112723 | - | 3.A.1.3.15 |
Gene ID: Rep_2393_c_0_96
Type: TC
Location: 106835 - 107572 (+)
Type: TC
Location: 106835 - 107572 (+)
Gene ID: Rep_2393_c_0_97
Type: peptidase
Location: 107617 - 109257 (+)
Type: peptidase
Location: 107617 - 109257 (+)
Gene ID: Rep_2393_c_0_98
Type: CAZyme
Location: 109366 - 110205 (-)
Type: CAZyme
Location: 109366 - 110205 (-)
Gene ID: Rep_2393_c_0_99
Type: CAZyme
Location: 110198 - 111058 (-)
Type: CAZyme
Location: 110198 - 111058 (-)
Gene ID: Rep_2393_c_0_100
Type: TC
Location: 111190 - 111855 (-)
Type: TC
Location: 111190 - 111855 (-)
Gene ID: Rep_2393_c_0_101
Type: TC
Location: 111887 - 112723 (-)
Type: TC
Location: 111887 - 112723 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Jutongia
Species
Jutongia huaianensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2393_c_0_99 | vegan > omnivore | 1.79658 | 0.00241 |
| Rep_2393_c_0_100 | vegan > omnivore | 2.16370 | 0.00241 |
| Rep_2393_c_0_101 | vegan > omnivore | 15.66527 | 0.00241 |