dbCAN Logo

Cluster: Rep_2393_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2393_c_0 Rep_2393_c_0_2062 2312309 2313940 - 3.A.1.121.4
CAZyme Rep_2393_c_0 Rep_2393_c_0_2063 2314175 2316148 + GH13_11
NULL(UNKNOWN) Rep_2393_c_0 Rep_2393_c_0_2064 2316275 2316466 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2393_c_0 Rep_2393_c_0_2065 2316581 2317096 + DUF5721
TC Rep_2393_c_0 Rep_2393_c_0_2066 2317344 2319083 + 3.A.11.1.3
TC Rep_2393_c_0 Rep_2393_c_0_2067 2319110 2320168 + 3.A.15.2.1
TC Rep_2393_c_0 Rep_2393_c_0_2068 2320433 2321647 + 3.A.15.1.1
pfam Rep_2393_c_0 Rep_2393_c_0_2069 2321746 2322252 + N_methyl
TC Rep_2393_c_0 Rep_2393_c_0_2070 2322297 2323064 + 3.A.15.2.1
Gene ID: Rep_2393_c_0_2062
Type: TC
Location: 2312309 - 2313940 (-)
Gene ID: Rep_2393_c_0_2063
Type: CAZyme
Location: 2314175 - 2316148 (+)
Gene ID: Rep_2393_c_0_2064
Type:
Location: 2316275 - 2316466 (-)
Gene ID: Rep_2393_c_0_2065
Type: pfam
Location: 2316581 - 2317096 (+)
Gene ID: Rep_2393_c_0_2066
Type: TC
Location: 2317344 - 2319083 (+)
Gene ID: Rep_2393_c_0_2067
Type: TC
Location: 2319110 - 2320168 (+)
Gene ID: Rep_2393_c_0_2068
Type: TC
Location: 2320433 - 2321647 (+)
Gene ID: Rep_2393_c_0_2069
Type: pfam
Location: 2321746 - 2322252 (+)
Gene ID: Rep_2393_c_0_2070
Type: TC
Location: 2322297 - 2323064 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List