Cluster: Rep_2393_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2393
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2393_c_0 | Rep_2393_c_0_1517 | 1702050 | 1706123 | + | 2.A.6.3.6 |
| STP | Rep_2393_c_0 | Rep_2393_c_0_1518 | 1706147 | 1707565 | + | HD |
| pfam | Rep_2393_c_0 | Rep_2393_c_0_1519 | 1707738 | 1711733 | + | LRR_5 |
| CAZyme | Rep_2393_c_0 | Rep_2393_c_0_1520 | 1711904 | 1714039 | + | GH13_39 |
Gene ID: Rep_2393_c_0_1517
Type: TC
Location: 1702050 - 1706123 (+)
Type: TC
Location: 1702050 - 1706123 (+)
Gene ID: Rep_2393_c_0_1518
Type: STP
Location: 1706147 - 1707565 (+)
Type: STP
Location: 1706147 - 1707565 (+)
Gene ID: Rep_2393_c_0_1519
Type: pfam
Location: 1707738 - 1711733 (+)
Type: pfam
Location: 1707738 - 1711733 (+)
Gene ID: Rep_2393_c_0_1520
Type: CAZyme
Location: 1711904 - 1714039 (+)
Type: CAZyme
Location: 1711904 - 1714039 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Jutongia
Species
Jutongia huaianensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2393_c_0_1519 | vegan > omnivore | 1.06271 | 0.00241 |