Cluster: Rep_2393_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2393
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2393_c_0 | Rep_2393_c_0_1301 | 1470517 | 1472433 | + | 3.A.1.106.12 |
| TC | Rep_2393_c_0 | Rep_2393_c_0_1302 | 1472426 | 1474294 | + | 3.A.1.111.2 |
| NULL(UNKNOWN) | Rep_2393_c_0 | Rep_2393_c_0_1303 | 1474482 | 1475258 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2393_c_0 | Rep_2393_c_0_1304 | 1475255 | 1475395 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2393_c_0 | Rep_2393_c_0_1305 | 1475392 | 1476393 | + | CE1 |
Gene ID: Rep_2393_c_0_1301
Type: TC
Location: 1470517 - 1472433 (+)
Type: TC
Location: 1470517 - 1472433 (+)
Gene ID: Rep_2393_c_0_1302
Type: TC
Location: 1472426 - 1474294 (+)
Type: TC
Location: 1472426 - 1474294 (+)
Gene ID: Rep_2393_c_0_1303
Type:
Location: 1474482 - 1475258 (+)
Type:
Location: 1474482 - 1475258 (+)
Gene ID: Rep_2393_c_0_1304
Type:
Location: 1475255 - 1475395 (+)
Type:
Location: 1475255 - 1475395 (+)
Gene ID: Rep_2393_c_0_1305
Type: CAZyme
Location: 1475392 - 1476393 (+)
Type: CAZyme
Location: 1475392 - 1476393 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Jutongia
Species
Jutongia huaianensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2393_c_0_1301 | vegan > omnivore | 2.09138 | 0.00241 |
| Rep_2393_c_0_1301 | vegetarian > omnivore | 1.71175 | 0.00000 |
| Rep_2393_c_0_1302 | vegan > omnivore | 2.16455 | 0.00241 |
| Rep_2393_c_0_1302 | vegetarian > omnivore | 1.90451 | 0.00000 |