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Cluster: Rep_2392_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2392_c_0 Rep_2392_c_0_1250 1366381 1368744 - GH31_3
NULL(UNKNOWN) Rep_2392_c_0 Rep_2392_c_0_1251 1368913 1371471 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2392_c_0 Rep_2392_c_0_1252 1371553 1372614 - 3.A.1.15.3
TF Rep_2392_c_0 Rep_2392_c_0_1253 1372607 1373038 - FUR
TC Rep_2392_c_0 Rep_2392_c_0_1254 1373732 1374418 + 9.B.104.1.3
pfam Rep_2392_c_0 Rep_2392_c_0_1255 1374497 1375513 + SCP2
pfam Rep_2392_c_0 Rep_2392_c_0_1256 1375644 1376069 + HIT | DcpS_C
CAZyme Rep_2392_c_0 Rep_2392_c_0_1257 1376229 1377728 - GH77
Gene ID: Rep_2392_c_0_1250
Type: CAZyme
Location: 1366381 - 1368744 (-)
Gene ID: Rep_2392_c_0_1251
Type:
Location: 1368913 - 1371471 (-)
Gene ID: Rep_2392_c_0_1252
Type: TC
Location: 1371553 - 1372614 (-)
Gene ID: Rep_2392_c_0_1253
Type: TF
Location: 1372607 - 1373038 (-)
Gene ID: Rep_2392_c_0_1254
Type: TC
Location: 1373732 - 1374418 (+)
Gene ID: Rep_2392_c_0_1255
Type: pfam
Location: 1374497 - 1375513 (+)
Gene ID: Rep_2392_c_0_1256
Type: pfam
Location: 1375644 - 1376069 (+)
Gene ID: Rep_2392_c_0_1257
Type: CAZyme
Location: 1376229 - 1377728 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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