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Cluster: Rep_2392_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2392_c_0 Rep_2392_c_0_958 1027086 1028801 - GT2
CAZyme Rep_2392_c_0 Rep_2392_c_0_959 1028834 1029760 - GT2
CAZyme Rep_2392_c_0 Rep_2392_c_0_960 1029726 1030955 - GT4
TC Rep_2392_c_0 Rep_2392_c_0_961 1030971 1032401 - 9.B.18.1.3
TF Rep_2392_c_0 Rep_2392_c_0_962 1032462 1033145 - GntR
pfam Rep_2392_c_0 Rep_2392_c_0_963 1033377 1035305 + Wzy_C
CAZyme Rep_2392_c_0 Rep_2392_c_0_964 1035348 1036457 + GT2
STP Rep_2392_c_0 Rep_2392_c_0_965 1036494 1037576 - HATPase_c | HisKA
TF Rep_2392_c_0 Rep_2392_c_0_966 1037685 1038413 - Trans_reg_C
TC Rep_2392_c_0 Rep_2392_c_0_967 1038544 1040022 - 9.B.18.1.2
TC Rep_2392_c_0 Rep_2392_c_0_968 1040131 1040895 - 8.A.3.2.3
Gene ID: Rep_2392_c_0_958
Type: CAZyme
Location: 1027086 - 1028801 (-)
Gene ID: Rep_2392_c_0_959
Type: CAZyme
Location: 1028834 - 1029760 (-)
Gene ID: Rep_2392_c_0_960
Type: CAZyme
Location: 1029726 - 1030955 (-)
Gene ID: Rep_2392_c_0_961
Type: TC
Location: 1030971 - 1032401 (-)
Gene ID: Rep_2392_c_0_962
Type: TF
Location: 1032462 - 1033145 (-)
Gene ID: Rep_2392_c_0_963
Type: pfam
Location: 1033377 - 1035305 (+)
Gene ID: Rep_2392_c_0_964
Type: CAZyme
Location: 1035348 - 1036457 (+)
Gene ID: Rep_2392_c_0_965
Type: STP
Location: 1036494 - 1037576 (-)
Gene ID: Rep_2392_c_0_966
Type: TF
Location: 1037685 - 1038413 (-)
Gene ID: Rep_2392_c_0_967
Type: TC
Location: 1038544 - 1040022 (-)
Gene ID: Rep_2392_c_0_968
Type: TC
Location: 1040131 - 1040895 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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