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Cluster: Rep_2392_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2392_c_0 Rep_2392_c_0_2937 3225507 3226301 + 3.A.1.134.12
TC Rep_2392_c_0 Rep_2392_c_0_2938 3226276 3228357 + 3.A.1.134.3
pfam Rep_2392_c_0 Rep_2392_c_0_2939 3228362 3229549 - Methyltransf_5
TC Rep_2392_c_0 Rep_2392_c_0_2940 3229738 3231498 + 3.A.1.135.5
TC Rep_2392_c_0 Rep_2392_c_0_2941 3231502 3233262 + 3.A.1.135.5
pfam Rep_2392_c_0 Rep_2392_c_0_2942 3233372 3234214 + S6PP | Hydrolase_3
CAZyme Rep_2392_c_0 Rep_2392_c_0_2943 3234279 3235217 + GH26
TF Rep_2392_c_0 Rep_2392_c_0_2944 3235327 3236067 - HTH_AraC | HTH_AraC
CAZyme Rep_2392_c_0 Rep_2392_c_0_2945 3236236 3237267 + GH5_37
TC Rep_2392_c_0 Rep_2392_c_0_2946 3237387 3238739 + 2.A.66.1.33
Gene ID: Rep_2392_c_0_2937
Type: TC
Location: 3225507 - 3226301 (+)
Gene ID: Rep_2392_c_0_2938
Type: TC
Location: 3226276 - 3228357 (+)
Gene ID: Rep_2392_c_0_2939
Type: pfam
Location: 3228362 - 3229549 (-)
Gene ID: Rep_2392_c_0_2940
Type: TC
Location: 3229738 - 3231498 (+)
Gene ID: Rep_2392_c_0_2941
Type: TC
Location: 3231502 - 3233262 (+)
Gene ID: Rep_2392_c_0_2942
Type: pfam
Location: 3233372 - 3234214 (+)
Gene ID: Rep_2392_c_0_2943
Type: CAZyme
Location: 3234279 - 3235217 (+)
Gene ID: Rep_2392_c_0_2944
Type: TF
Location: 3235327 - 3236067 (-)
Gene ID: Rep_2392_c_0_2945
Type: CAZyme
Location: 3236236 - 3237267 (+)
Gene ID: Rep_2392_c_0_2946
Type: TC
Location: 3237387 - 3238739 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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