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Cluster: Rep_2392_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2392_c_0 Rep_2392_c_0_2910 3191934 3192617 + 3.A.1.122.2
TC Rep_2392_c_0 Rep_2392_c_0_2911 3192836 3193531 - 2.A.106.1.3
NULL(UNKNOWN) Rep_2392_c_0 Rep_2392_c_0_2912 3193488 3193754 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2392_c_0 Rep_2392_c_0_2913 3193946 3195745 + AAA_14
CAZyme Rep_2392_c_0 Rep_2392_c_0_2914 3196086 3198488 + GH94
NULL(UNKNOWN) Rep_2392_c_0 Rep_2392_c_0_2915 3198613 3199125 + NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_2392_c_0 Rep_2392_c_0_2916 3199357 3200139 - MCPsignal
CAZyme Rep_2392_c_0 Rep_2392_c_0_2917 3200326 3203082 + GH2
TC Rep_2392_c_0 Rep_2392_c_0_2918 3203130 3204419 + 3.D.10.1.4
Gene ID: Rep_2392_c_0_2910
Type: TC
Location: 3191934 - 3192617 (+)
Gene ID: Rep_2392_c_0_2911
Type: TC
Location: 3192836 - 3193531 (-)
Gene ID: Rep_2392_c_0_2912
Type:
Location: 3193488 - 3193754 (-)
Gene ID: Rep_2392_c_0_2913
Type: pfam
Location: 3193946 - 3195745 (+)
Gene ID: Rep_2392_c_0_2914
Type: CAZyme
Location: 3196086 - 3198488 (+)
Gene ID: Rep_2392_c_0_2915
Type:
Location: 3198613 - 3199125 (+)
Gene ID: Rep_2392_c_0_2916
Type: STP
Location: 3199357 - 3200139 (-)
Gene ID: Rep_2392_c_0_2917
Type: CAZyme
Location: 3200326 - 3203082 (+)
Gene ID: Rep_2392_c_0_2918
Type: TC
Location: 3203130 - 3204419 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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