Cluster: Rep_2392_CGC28
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2392
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2392_c_0 | Rep_2392_c_0_2631 | 2882502 | 2884001 | + | 2.A.35.2.1 |
| pfam | Rep_2392_c_0 | Rep_2392_c_0_2632 | 2884129 | 2885337 | + | DnaJ | DnaJ_C |
| STP | Rep_2392_c_0 | Rep_2392_c_0_2633 | 2885446 | 2885973 | + | Nitroreductase |
| TC | Rep_2392_c_0 | Rep_2392_c_0_2634 | 2886090 | 2888234 | + | 2.A.53.1.8 |
| CAZyme | Rep_2392_c_0 | Rep_2392_c_0_2635 | 2888340 | 2890016 | - | CBM13 | GH5_4 |
| TF | Rep_2392_c_0 | Rep_2392_c_0_2636 | 2890260 | 2891291 | - | LacI |
| TC | Rep_2392_c_0 | Rep_2392_c_0_2637 | 2891534 | 2892856 | + | 3.A.1.1.20 |
| TC | Rep_2392_c_0 | Rep_2392_c_0_2638 | 2892880 | 2893758 | + | 3.A.1.1.20 |
| TC | Rep_2392_c_0 | Rep_2392_c_0_2639 | 2893730 | 2894581 | + | 3.A.1.1.20 |
| TC | Rep_2392_c_0 | Rep_2392_c_0_2640 | 2894585 | 2895682 | + | 3.A.1.1.27 |
| CAZyme | Rep_2392_c_0 | Rep_2392_c_0_2641 | 2895690 | 2897216 | + | GH32 |
| STP | Rep_2392_c_0 | Rep_2392_c_0_2642 | 2897240 | 2898202 | + | PfkB |
| pfam | Rep_2392_c_0 | Rep_2392_c_0_2643 | 2898420 | 2900402 | + | Helicase_C | UVR | ResIII | UvrB | UvrB_inter |
| CAZyme | Rep_2392_c_0 | Rep_2392_c_0_2644 | 2900540 | 2902582 | + | GH42 |
Gene ID: Rep_2392_c_0_2631
Type: TC
Location: 2882502 - 2884001 (+)
Type: TC
Location: 2882502 - 2884001 (+)
Gene ID: Rep_2392_c_0_2632
Type: pfam
Location: 2884129 - 2885337 (+)
Type: pfam
Location: 2884129 - 2885337 (+)
Gene ID: Rep_2392_c_0_2633
Type: STP
Location: 2885446 - 2885973 (+)
Type: STP
Location: 2885446 - 2885973 (+)
Gene ID: Rep_2392_c_0_2634
Type: TC
Location: 2886090 - 2888234 (+)
Type: TC
Location: 2886090 - 2888234 (+)
Gene ID: Rep_2392_c_0_2635
Type: CAZyme
Location: 2888340 - 2890016 (-)
Type: CAZyme
Location: 2888340 - 2890016 (-)
Gene ID: Rep_2392_c_0_2636
Type: TF
Location: 2890260 - 2891291 (-)
Type: TF
Location: 2890260 - 2891291 (-)
Gene ID: Rep_2392_c_0_2637
Type: TC
Location: 2891534 - 2892856 (+)
Type: TC
Location: 2891534 - 2892856 (+)
Gene ID: Rep_2392_c_0_2638
Type: TC
Location: 2892880 - 2893758 (+)
Type: TC
Location: 2892880 - 2893758 (+)
Gene ID: Rep_2392_c_0_2639
Type: TC
Location: 2893730 - 2894581 (+)
Type: TC
Location: 2893730 - 2894581 (+)
Gene ID: Rep_2392_c_0_2640
Type: TC
Location: 2894585 - 2895682 (+)
Type: TC
Location: 2894585 - 2895682 (+)
Gene ID: Rep_2392_c_0_2641
Type: CAZyme
Location: 2895690 - 2897216 (+)
Type: CAZyme
Location: 2895690 - 2897216 (+)
Gene ID: Rep_2392_c_0_2642
Type: STP
Location: 2897240 - 2898202 (+)
Type: STP
Location: 2897240 - 2898202 (+)
Gene ID: Rep_2392_c_0_2643
Type: pfam
Location: 2898420 - 2900402 (+)
Type: pfam
Location: 2898420 - 2900402 (+)
Gene ID: Rep_2392_c_0_2644
Type: CAZyme
Location: 2900540 - 2902582 (+)
Type: CAZyme
Location: 2900540 - 2902582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Jutongia
Species
Jutongia sp003524945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.