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Cluster: Rep_2392_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2392_c_0 Rep_2392_c_0_2551 2820346 2821107 + GT26
TC Rep_2392_c_0 Rep_2392_c_0_2552 2821231 2822109 + 2.A.115.1.2
TC Rep_2392_c_0 Rep_2392_c_0_2553 2822316 2823428 + 3.A.1.1.22
pfam Rep_2392_c_0 Rep_2392_c_0_2554 2823686 2824774 + HTH_30 | GGDEF_2
TC Rep_2392_c_0 Rep_2392_c_0_2555 2824845 2825594 + 3.A.1.140.1
pfam Rep_2392_c_0 Rep_2392_c_0_2556 2825591 2826493 + FtsX | FtsX_ECD
STP Rep_2392_c_0 Rep_2392_c_0_2557 2826582 2827889 + Peptidase_M23
TC Rep_2392_c_0 Rep_2392_c_0_2558 2827970 2829184 + 9.B.174.1.2
Gene ID: Rep_2392_c_0_2551
Type: CAZyme
Location: 2820346 - 2821107 (+)
Gene ID: Rep_2392_c_0_2552
Type: TC
Location: 2821231 - 2822109 (+)
Gene ID: Rep_2392_c_0_2553
Type: TC
Location: 2822316 - 2823428 (+)
Gene ID: Rep_2392_c_0_2554
Type: pfam
Location: 2823686 - 2824774 (+)
Gene ID: Rep_2392_c_0_2555
Type: TC
Location: 2824845 - 2825594 (+)
Gene ID: Rep_2392_c_0_2556
Type: pfam
Location: 2825591 - 2826493 (+)
Gene ID: Rep_2392_c_0_2557
Type: STP
Location: 2826582 - 2827889 (+)
Gene ID: Rep_2392_c_0_2558
Type: TC
Location: 2827970 - 2829184 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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