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Cluster: Rep_2392_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2392_c_0 Rep_2392_c_0_1935 2179226 2179993 - 3.A.1.3.23
TC Rep_2392_c_0 Rep_2392_c_0_1936 2180021 2181271 - 9.B.34.1.3
pfam Rep_2392_c_0 Rep_2392_c_0_1937 2181382 2182395 - DUF975
CAZyme Rep_2392_c_0 Rep_2392_c_0_1938 2182726 2183775 - GH5_2
NULL(UNKNOWN) Rep_2392_c_0 Rep_2392_c_0_1939 2183772 2183888 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2392_c_0 Rep_2392_c_0_1940 2183900 2184841 - Dus
TC Rep_2392_c_0 Rep_2392_c_0_1941 2184951 2187422 - 3.A.1.122.13
NULL(UNKNOWN) Rep_2392_c_0 Rep_2392_c_0_1942 2187406 2188959 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2392_c_0 Rep_2392_c_0_1943 2189028 2191427 - 3.A.1.122.13
pfam Rep_2392_c_0 Rep_2392_c_0_1944 2191678 2192085 - ATP-synt_DE | ATP-synt_DE_N
TC Rep_2392_c_0 Rep_2392_c_0_1945 2192097 2193500 - 3.A.2.1.5
TC Rep_2392_c_0 Rep_2392_c_0_1946 2193642 2194520 - 3.A.2.1.5
TC Rep_2392_c_0 Rep_2392_c_0_1947 2194559 2196067 - 3.A.2.1.5
TC Rep_2392_c_0 Rep_2392_c_0_1948 2196143 2196694 - 3.A.2.1.2
pfam Rep_2392_c_0 Rep_2392_c_0_1949 2196682 2197236 - ATP-synt_B
TC Rep_2392_c_0 Rep_2392_c_0_1950 2197275 2197538 - 3.A.2.1.5
TC Rep_2392_c_0 Rep_2392_c_0_1951 2197573 2198343 - 3.A.2.1.5
Gene ID: Rep_2392_c_0_1935
Type: TC
Location: 2179226 - 2179993 (-)
Gene ID: Rep_2392_c_0_1936
Type: TC
Location: 2180021 - 2181271 (-)
Gene ID: Rep_2392_c_0_1937
Type: pfam
Location: 2181382 - 2182395 (-)
Gene ID: Rep_2392_c_0_1938
Type: CAZyme
Location: 2182726 - 2183775 (-)
Gene ID: Rep_2392_c_0_1939
Type:
Location: 2183772 - 2183888 (-)
Gene ID: Rep_2392_c_0_1940
Type: pfam
Location: 2183900 - 2184841 (-)
Gene ID: Rep_2392_c_0_1941
Type: TC
Location: 2184951 - 2187422 (-)
Gene ID: Rep_2392_c_0_1942
Type:
Location: 2187406 - 2188959 (-)
Gene ID: Rep_2392_c_0_1943
Type: TC
Location: 2189028 - 2191427 (-)
Gene ID: Rep_2392_c_0_1944
Type: pfam
Location: 2191678 - 2192085 (-)
Gene ID: Rep_2392_c_0_1945
Type: TC
Location: 2192097 - 2193500 (-)
Gene ID: Rep_2392_c_0_1946
Type: TC
Location: 2193642 - 2194520 (-)
Gene ID: Rep_2392_c_0_1947
Type: TC
Location: 2194559 - 2196067 (-)
Gene ID: Rep_2392_c_0_1948
Type: TC
Location: 2196143 - 2196694 (-)
Gene ID: Rep_2392_c_0_1949
Type: pfam
Location: 2196682 - 2197236 (-)
Gene ID: Rep_2392_c_0_1950
Type: TC
Location: 2197275 - 2197538 (-)
Gene ID: Rep_2392_c_0_1951
Type: TC
Location: 2197573 - 2198343 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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