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Cluster: Rep_2390_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2390_c_1 Rep_2390_c_1_754 848280 848972 - 2.A.122.1.6
TC Rep_2390_c_1 Rep_2390_c_1_755 849061 849429 - 1.E.14.1.1
CAZyme Rep_2390_c_1 Rep_2390_c_1_756 849902 851545 + GH25
CAZyme Rep_2390_c_1 Rep_2390_c_1_757 851733 853961 - CBM48 | GH13_9
Gene ID: Rep_2390_c_1_754
Type: TC
Location: 848280 - 848972 (-)
Gene ID: Rep_2390_c_1_755
Type: TC
Location: 849061 - 849429 (-)
Gene ID: Rep_2390_c_1_756
Type: CAZyme
Location: 849902 - 851545 (+)
Gene ID: Rep_2390_c_1_757
Type: CAZyme
Location: 851733 - 853961 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2390_c_1_754 vegan > omnivore 2.44362 0.00241
Rep_2390_c_1_755 vegan > omnivore 1.16799 0.00241
Rep_2390_c_1_756 vegan > omnivore 1.99530 0.00241

🧭 Explore Read Mapping of CGC

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