dbCAN HGM

Cluster: Rep_2390_CGC18

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_2390_c_1	Rep_2390_c_1_727	815964	817517	-	GH13_44
TC	Rep_2390_c_1	Rep_2390_c_1_728	817905	818933	-	3.A.1.2.14
TC	Rep_2390_c_1	Rep_2390_c_1_729	818935	820011	-	3.A.1.2.14
TC	Rep_2390_c_1	Rep_2390_c_1_730	820004	821521	-	3.A.1.2.23
TC	Rep_2390_c_1	Rep_2390_c_1_731	821704	822780	-	3.A.1.2.14
STP	Rep_2390_c_1	Rep_2390_c_1_732	822912	824348	-	HATPase_c
TF	Rep_2390_c_1	Rep_2390_c_1_733	824345	825976	-	HTH_AraC \| HTH_AraC
TC	Rep_2390_c_1	Rep_2390_c_1_734	826008	827873	-	1.B.52.2.1

Gene ID: Rep_2390_c_1_727
Type: CAZyme
Location: 815964 - 817517 (-)

Gene ID: Rep_2390_c_1_728
Type: TC
Location: 817905 - 818933 (-)

Gene ID: Rep_2390_c_1_729
Type: TC
Location: 818935 - 820011 (-)

Gene ID: Rep_2390_c_1_730
Type: TC
Location: 820004 - 821521 (-)

Gene ID: Rep_2390_c_1_731
Type: TC
Location: 821704 - 822780 (-)

Gene ID: Rep_2390_c_1_732
Type: STP
Location: 822912 - 824348 (-)

Gene ID: Rep_2390_c_1_733
Type: TF
Location: 824345 - 825976 (-)

Gene ID: Rep_2390_c_1_734
Type: TC
Location: 826008 - 827873 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2390_c_1_730	vegan > omnivore	1.41127	0.00241
Rep_2390_c_1_731	vegan > omnivore	1.46750	0.00241
Rep_2390_c_1_732	vegan > omnivore	2.29848	0.00241
Rep_2390_c_1_732	vegetarian > omnivore	1.10424	0.02960
Rep_2390_c_1_734	vegan > omnivore	2.09656	0.00241