dbCAN HGM

Cluster: Rep_2390_CGC13

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_2390_c_1	Rep_2390_c_1_536	586182	587252	+	GT28
pfam	Rep_2390_c_1	Rep_2390_c_1_537	587541	588716	-	WG_beta_rep \| WG_beta_rep \| WG_beta_rep \| WG_beta_rep \| WG_beta_rep \| WG_beta_rep \| WG_beta_rep \| WG_beta_rep \| WG_beta_rep
TC	Rep_2390_c_1	Rep_2390_c_1_538	588775	589182	-	2.A.78.1.1
TC	Rep_2390_c_1	Rep_2390_c_1_539	589698	590579	-	2.A.115.1.1
STP	Rep_2390_c_1	Rep_2390_c_1_540	590650	591465	-	SBP_bac_3
pfam	Rep_2390_c_1	Rep_2390_c_1_541	592011	592289	+	ABM
TC	Rep_2390_c_1	Rep_2390_c_1_542	592264	593598	-	2.A.35.1.5

Gene ID: Rep_2390_c_1_536
Type: CAZyme
Location: 586182 - 587252 (+)

Gene ID: Rep_2390_c_1_537
Type: pfam
Location: 587541 - 588716 (-)

Gene ID: Rep_2390_c_1_538
Type: TC
Location: 588775 - 589182 (-)

Gene ID: Rep_2390_c_1_539
Type: TC
Location: 589698 - 590579 (-)

Gene ID: Rep_2390_c_1_540
Type: STP
Location: 590650 - 591465 (-)

Gene ID: Rep_2390_c_1_541
Type: pfam
Location: 592011 - 592289 (+)

Gene ID: Rep_2390_c_1_542
Type: TC
Location: 592264 - 593598 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2390_c_1_537	vegan > omnivore	1.66596	0.00241
Rep_2390_c_1_538	vegan > omnivore	2.51669	0.00241
Rep_2390_c_1_539	vegan > omnivore	1.67515	0.00241
Rep_2390_c_1_540	vegan > omnivore	1.59801	0.00241
Rep_2390_c_1_541	vegan > omnivore	2.38345	0.00241
Rep_2390_c_1_542	vegan > omnivore	1.34619	0.00241