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Cluster: Rep_2390_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2390_c_1 Rep_2390_c_1_320 376214 378646 - 3.A.9.1.2
pfam Rep_2390_c_1 Rep_2390_c_1_321 378650 380119 - Cadherin-like
CAZyme Rep_2390_c_1 Rep_2390_c_1_322 380268 382100 - GH73
Gene ID: Rep_2390_c_1_320
Type: TC
Location: 376214 - 378646 (-)
Gene ID: Rep_2390_c_1_321
Type: pfam
Location: 378650 - 380119 (-)
Gene ID: Rep_2390_c_1_322
Type: CAZyme
Location: 380268 - 382100 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2390_c_1_321 vegan > omnivore 1.56458 0.00241
Rep_2390_c_1_322 vegan > omnivore 1.34418 0.00241

🧭 Explore Read Mapping of CGC

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