Cluster: Rep_2383_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_0 | Rep_2383_c_0_225 | 227778 | 230345 | - | 3.A.5.1.3 |
| pfam | Rep_2383_c_0 | Rep_2383_c_0_226 | 230504 | 231031 | - | Ribosomal_S30AE | Ribosom_S30AE_C |
| CAZyme | Rep_2383_c_0 | Rep_2383_c_0_227 | 231541 | 233943 | - | GH8 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_228 | 234031 | 234564 | - | 9.A.11.1.1 |
| pfam | Rep_2383_c_0 | Rep_2383_c_0_229 | 234597 | 235016 | - | SpoVAB |
| TC | Rep_2383_c_0 | Rep_2383_c_0_230 | 235006 | 235659 | - | 9.A.11.1.1 |
Gene ID: Rep_2383_c_0_225
Type: TC
Location: 227778 - 230345 (-)
Type: TC
Location: 227778 - 230345 (-)
Gene ID: Rep_2383_c_0_226
Type: pfam
Location: 230504 - 231031 (-)
Type: pfam
Location: 230504 - 231031 (-)
Gene ID: Rep_2383_c_0_227
Type: CAZyme
Location: 231541 - 233943 (-)
Type: CAZyme
Location: 231541 - 233943 (-)
Gene ID: Rep_2383_c_0_228
Type: TC
Location: 234031 - 234564 (-)
Type: TC
Location: 234031 - 234564 (-)
Gene ID: Rep_2383_c_0_229
Type: pfam
Location: 234597 - 235016 (-)
Type: pfam
Location: 234597 - 235016 (-)
Gene ID: Rep_2383_c_0_230
Type: TC
Location: 235006 - 235659 (-)
Type: TC
Location: 235006 - 235659 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.