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Cluster: Rep_2383_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2383_c_0 Rep_2383_c_0_212 203295 205871 - 3.A.9.1.2
pfam Rep_2383_c_0 Rep_2383_c_0_213 206038 208449 - tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1_2
peptidase Rep_2383_c_0 Rep_2383_c_0_214 208474 209925 - C82.UNA
TC Rep_2383_c_0 Rep_2383_c_0_215 210074 212671 + 3.A.3.2.21
pfam Rep_2383_c_0 Rep_2383_c_0_216 212718 214856 - S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
CAZyme Rep_2383_c_0 Rep_2383_c_0_217 214989 217148 + GH3
CAZyme Rep_2383_c_0 Rep_2383_c_0_218 217242 219512 - CBM9
CAZyme Rep_2383_c_0 Rep_2383_c_0_219 219624 221876 - GH31_3
Gene ID: Rep_2383_c_0_212
Type: TC
Location: 203295 - 205871 (-)
Gene ID: Rep_2383_c_0_213
Type: pfam
Location: 206038 - 208449 (-)
Gene ID: Rep_2383_c_0_214
Type: peptidase
Location: 208474 - 209925 (-)
Gene ID: Rep_2383_c_0_215
Type: TC
Location: 210074 - 212671 (+)
Gene ID: Rep_2383_c_0_216
Type: pfam
Location: 212718 - 214856 (-)
Gene ID: Rep_2383_c_0_217
Type: CAZyme
Location: 214989 - 217148 (+)
Gene ID: Rep_2383_c_0_218
Type: CAZyme
Location: 217242 - 219512 (-)
Gene ID: Rep_2383_c_0_219
Type: CAZyme
Location: 219624 - 221876 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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