Cluster: Rep_2383_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2383
- CGC Family ID: CGCFAM_06301
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2383_c_0 | Rep_2383_c_0_202 | 190037 | 191506 | - | GH43_16 |
| CAZyme | Rep_2383_c_0 | Rep_2383_c_0_203 | 191522 | 193627 | - | CBM91 | GH43_10 |
| pfam | Rep_2383_c_0 | Rep_2383_c_0_204 | 193697 | 194911 | - | CBM_4_9 | LRR_5 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_205 | 195087 | 196133 | - | 3.A.1.2.25 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_206 | 196135 | 197250 | - | 3.A.1.2.14 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_207 | 197250 | 198761 | - | 3.A.1.2.23 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_208 | 198893 | 199954 | - | 3.A.1.2.25 |
Gene ID: Rep_2383_c_0_202
Type: CAZyme
Location: 190037 - 191506 (-)
Type: CAZyme
Location: 190037 - 191506 (-)
Gene ID: Rep_2383_c_0_203
Type: CAZyme
Location: 191522 - 193627 (-)
Type: CAZyme
Location: 191522 - 193627 (-)
Gene ID: Rep_2383_c_0_204
Type: pfam
Location: 193697 - 194911 (-)
Type: pfam
Location: 193697 - 194911 (-)
Gene ID: Rep_2383_c_0_205
Type: TC
Location: 195087 - 196133 (-)
Type: TC
Location: 195087 - 196133 (-)
Gene ID: Rep_2383_c_0_206
Type: TC
Location: 196135 - 197250 (-)
Type: TC
Location: 196135 - 197250 (-)
Gene ID: Rep_2383_c_0_207
Type: TC
Location: 197250 - 198761 (-)
Type: TC
Location: 197250 - 198761 (-)
Gene ID: Rep_2383_c_0_208
Type: TC
Location: 198893 - 199954 (-)
Type: TC
Location: 198893 - 199954 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.