Cluster: Rep_2383_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_0 | Rep_2383_c_0_181 | 168413 | 170269 | - | 1.A.33.1.4 |
| pfam | Rep_2383_c_0 | Rep_2383_c_0_182 | 170295 | 170948 | - | GrpE |
| TF | Rep_2383_c_0 | Rep_2383_c_0_183 | 170975 | 172000 | - | 0043758 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_184 | 172235 | 174478 | - | 2.A.6.4.2 |
| CAZyme | Rep_2383_c_0 | Rep_2383_c_0_185 | 174665 | 175552 | + | CE4 |
Gene ID: Rep_2383_c_0_181
Type: TC
Location: 168413 - 170269 (-)
Type: TC
Location: 168413 - 170269 (-)
Gene ID: Rep_2383_c_0_182
Type: pfam
Location: 170295 - 170948 (-)
Type: pfam
Location: 170295 - 170948 (-)
Gene ID: Rep_2383_c_0_183
Type: TF
Location: 170975 - 172000 (-)
Type: TF
Location: 170975 - 172000 (-)
Gene ID: Rep_2383_c_0_184
Type: TC
Location: 172235 - 174478 (-)
Type: TC
Location: 172235 - 174478 (-)
Gene ID: Rep_2383_c_0_185
Type: CAZyme
Location: 174665 - 175552 (+)
Type: CAZyme
Location: 174665 - 175552 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.