Cluster: Rep_2383_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_0 | Rep_2383_c_0_130 | 118534 | 120990 | - | 3.A.9.1.2 |
| TF | Rep_2383_c_0 | Rep_2383_c_0_131 | 121033 | 121404 | - | GntR |
| pfam | Rep_2383_c_0 | Rep_2383_c_0_132 | 121419 | 122702 | - | Cohesin | Cadherin-like |
| CAZyme | Rep_2383_c_0 | Rep_2383_c_0_133 | 122719 | 124851 | - | GH73 |
Gene ID: Rep_2383_c_0_130
Type: TC
Location: 118534 - 120990 (-)
Type: TC
Location: 118534 - 120990 (-)
Gene ID: Rep_2383_c_0_131
Type: TF
Location: 121033 - 121404 (-)
Type: TF
Location: 121033 - 121404 (-)
Gene ID: Rep_2383_c_0_132
Type: pfam
Location: 121419 - 122702 (-)
Type: pfam
Location: 121419 - 122702 (-)
Gene ID: Rep_2383_c_0_133
Type: CAZyme
Location: 122719 - 124851 (-)
Type: CAZyme
Location: 122719 - 124851 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.