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Cluster: Rep_2383_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2383_c_0 Rep_2383_c_0_108 91045 93405 - 9.A.8.1.6
NULL(UNKNOWN) Rep_2383_c_0 Rep_2383_c_0_109 93424 93819 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2383_c_0 Rep_2383_c_0_110 94160 94606 - HD_4
TC Rep_2383_c_0 Rep_2383_c_0_111 94645 95433 - 2.A.5.5.2
TC Rep_2383_c_0 Rep_2383_c_0_112 95556 97313 + 9.B.10.1.1
CAZyme Rep_2383_c_0 Rep_2383_c_0_113 97371 99938 - CBM91 | GH43_10
CAZyme Rep_2383_c_0 Rep_2383_c_0_114 99963 102671 - GH43_27
CAZyme Rep_2383_c_0 Rep_2383_c_0_115 102673 105252 - GH43_20 | GH43_26
TF Rep_2383_c_0 Rep_2383_c_0_116 105333 106121 + HTH_AraC
CAZyme Rep_2383_c_0 Rep_2383_c_0_117 106178 108100 - GH43_29
Gene ID: Rep_2383_c_0_108
Type: TC
Location: 91045 - 93405 (-)
Gene ID: Rep_2383_c_0_109
Type:
Location: 93424 - 93819 (-)
Gene ID: Rep_2383_c_0_110
Type: pfam
Location: 94160 - 94606 (-)
Gene ID: Rep_2383_c_0_111
Type: TC
Location: 94645 - 95433 (-)
Gene ID: Rep_2383_c_0_112
Type: TC
Location: 95556 - 97313 (+)
Gene ID: Rep_2383_c_0_113
Type: CAZyme
Location: 97371 - 99938 (-)
Gene ID: Rep_2383_c_0_114
Type: CAZyme
Location: 99963 - 102671 (-)
Gene ID: Rep_2383_c_0_115
Type: CAZyme
Location: 102673 - 105252 (-)
Gene ID: Rep_2383_c_0_116
Type: TF
Location: 105333 - 106121 (+)
Gene ID: Rep_2383_c_0_117
Type: CAZyme
Location: 106178 - 108100 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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