Cluster: Rep_2383_CGC38
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2383
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2383_c_11 | Rep_2383_c_11_15 | 14454 | 16961 | - | CBM91 | GH43_10 |
| CAZyme | Rep_2383_c_11 | Rep_2383_c_11_16 | 16993 | 19566 | - | GH51_2 |
| TF | Rep_2383_c_11 | Rep_2383_c_11_17 | 19694 | 20458 | + | HTH_AraC | HTH_AraC |
| pfam | Rep_2383_c_11 | Rep_2383_c_11_18 | 20448 | 21263 | - | DUF4097 |
| TC | Rep_2383_c_11 | Rep_2383_c_11_19 | 21260 | 21946 | - | 9.B.116.3.1 |
Gene ID: Rep_2383_c_11_15
Type: CAZyme
Location: 14454 - 16961 (-)
Type: CAZyme
Location: 14454 - 16961 (-)
Gene ID: Rep_2383_c_11_16
Type: CAZyme
Location: 16993 - 19566 (-)
Type: CAZyme
Location: 16993 - 19566 (-)
Gene ID: Rep_2383_c_11_17
Type: TF
Location: 19694 - 20458 (+)
Type: TF
Location: 19694 - 20458 (+)
Gene ID: Rep_2383_c_11_18
Type: pfam
Location: 20448 - 21263 (-)
Type: pfam
Location: 20448 - 21263 (-)
Gene ID: Rep_2383_c_11_19
Type: TC
Location: 21260 - 21946 (-)
Type: TC
Location: 21260 - 21946 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.