Cluster: Rep_2383_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- CGC Family ID: CGCFAM_10999
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_10 | Rep_2383_c_10_30 | 26627 | 28261 | + | 4.C.1.1.4 |
| CAZyme | Rep_2383_c_10 | Rep_2383_c_10_31 | 28267 | 29484 | + | CE4 |
| pfam | Rep_2383_c_10 | Rep_2383_c_10_32 | 29558 | 30118 | + | Cons_hypoth95 | MTS | Methyltransf_15 |
| NULL(UNKNOWN) | Rep_2383_c_10 | Rep_2383_c_10_33 | 30137 | 30769 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2383_c_10 | Rep_2383_c_10_34 | 30747 | 31631 | - | 9.A.5.3.2 |
Gene ID: Rep_2383_c_10_30
Type: TC
Location: 26627 - 28261 (+)
Type: TC
Location: 26627 - 28261 (+)
Gene ID: Rep_2383_c_10_31
Type: CAZyme
Location: 28267 - 29484 (+)
Type: CAZyme
Location: 28267 - 29484 (+)
Gene ID: Rep_2383_c_10_32
Type: pfam
Location: 29558 - 30118 (+)
Type: pfam
Location: 29558 - 30118 (+)
Gene ID: Rep_2383_c_10_33
Type:
Location: 30137 - 30769 (+)
Type:
Location: 30137 - 30769 (+)
Gene ID: Rep_2383_c_10_34
Type: TC
Location: 30747 - 31631 (-)
Type: TC
Location: 30747 - 31631 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.