Cluster: Rep_2383_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2383
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_9 | Rep_2383_c_9_13 | 13258 | 14271 | - | 8.A.21.2.4 |
| CAZyme | Rep_2383_c_9 | Rep_2383_c_9_14 | 14368 | 17958 | - | GH115 |
| pfam | Rep_2383_c_9 | Rep_2383_c_9_15 | 17979 | 19622 | - | Lipase_GDSL | Lipase_GDSL_2 |
| TF | Rep_2383_c_9 | Rep_2383_c_9_16 | 19785 | 20660 | + | HTH_AraC |
| CAZyme | Rep_2383_c_9 | Rep_2383_c_9_17 | 20726 | 23182 | - | GT35 |
Gene ID: Rep_2383_c_9_13
Type: TC
Location: 13258 - 14271 (-)
Type: TC
Location: 13258 - 14271 (-)
Gene ID: Rep_2383_c_9_14
Type: CAZyme
Location: 14368 - 17958 (-)
Type: CAZyme
Location: 14368 - 17958 (-)
Gene ID: Rep_2383_c_9_15
Type: pfam
Location: 17979 - 19622 (-)
Type: pfam
Location: 17979 - 19622 (-)
Gene ID: Rep_2383_c_9_16
Type: TF
Location: 19785 - 20660 (+)
Type: TF
Location: 19785 - 20660 (+)
Gene ID: Rep_2383_c_9_17
Type: CAZyme
Location: 20726 - 23182 (-)
Type: CAZyme
Location: 20726 - 23182 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.