Cluster: Rep_2383_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2383
- CGC Family ID: CGCFAM_06352
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2383_c_7 | Rep_2383_c_7_49 | 55511 | 57637 | - | CBM91 | GH43_10 |
| CAZyme | Rep_2383_c_7 | Rep_2383_c_7_50 | 57641 | 59635 | - | GH43_35 |
| TF | Rep_2383_c_7 | Rep_2383_c_7_51 | 59800 | 60564 | + | HTH_AraC | HTH_AraC |
| STP | Rep_2383_c_7 | Rep_2383_c_7_52 | 60659 | 61456 | + | SBP_bac_3 |
| TC | Rep_2383_c_7 | Rep_2383_c_7_53 | 61477 | 62163 | + | 3.A.1.3.14 |
| TC | Rep_2383_c_7 | Rep_2383_c_7_54 | 62179 | 62961 | + | 3.A.1.3.13 |
Gene ID: Rep_2383_c_7_49
Type: CAZyme
Location: 55511 - 57637 (-)
Type: CAZyme
Location: 55511 - 57637 (-)
Gene ID: Rep_2383_c_7_50
Type: CAZyme
Location: 57641 - 59635 (-)
Type: CAZyme
Location: 57641 - 59635 (-)
Gene ID: Rep_2383_c_7_51
Type: TF
Location: 59800 - 60564 (+)
Type: TF
Location: 59800 - 60564 (+)
Gene ID: Rep_2383_c_7_52
Type: STP
Location: 60659 - 61456 (+)
Type: STP
Location: 60659 - 61456 (+)
Gene ID: Rep_2383_c_7_53
Type: TC
Location: 61477 - 62163 (+)
Type: TC
Location: 61477 - 62163 (+)
Gene ID: Rep_2383_c_7_54
Type: TC
Location: 62179 - 62961 (+)
Type: TC
Location: 62179 - 62961 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.