Cluster: Rep_2383_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_6 | Rep_2383_c_6_48 | 41474 | 42856 | + | 4.A.1.2.2 |
| CAZyme | Rep_2383_c_6 | Rep_2383_c_6_49 | 42849 | 44279 | + | GH1 |
| pfam | Rep_2383_c_6 | Rep_2383_c_6_50 | 44371 | 45456 | + | Mbeg1-like |
| pfam | Rep_2383_c_6 | Rep_2383_c_6_51 | 45473 | 46825 | + | DUF676 |
| TC | Rep_2383_c_6 | Rep_2383_c_6_52 | 47058 | 48602 | + | 3.A.6.1.1 |
Gene ID: Rep_2383_c_6_48
Type: TC
Location: 41474 - 42856 (+)
Type: TC
Location: 41474 - 42856 (+)
Gene ID: Rep_2383_c_6_49
Type: CAZyme
Location: 42849 - 44279 (+)
Type: CAZyme
Location: 42849 - 44279 (+)
Gene ID: Rep_2383_c_6_50
Type: pfam
Location: 44371 - 45456 (+)
Type: pfam
Location: 44371 - 45456 (+)
Gene ID: Rep_2383_c_6_51
Type: pfam
Location: 45473 - 46825 (+)
Type: pfam
Location: 45473 - 46825 (+)
Gene ID: Rep_2383_c_6_52
Type: TC
Location: 47058 - 48602 (+)
Type: TC
Location: 47058 - 48602 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.